BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C03LP1|AL429535
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1572 1722 0.0
>3x_Contig1572
Length = 12810
Score = 1722 bits (866), Expect = 0.0
Identities = 885/893 (99%), Gaps = 2/893 (0%)
Strand = Plus / Plus
Query: 1 atcacttcagcaggaacacgaaccatacatgcagaaatctcaccaaaactagaagagacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 atcacttcagcaggaacacgaaccatacatgcagaaatctcaccaaaactagaagagacc 3360
Query: 61 atatgcgaaac--gtatctgccgtttgatcttcaccttttggcaaaagctgaccgataac 118
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 atatgcgaaagcggtatctgccgtttgatcttcaccttttggcaaaagctgaccgataac 3420
Query: 119 aggccgcgaccagcacttcatcgaatcatacgcaacgaaaaacaaagaagcacttggtgc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 aggccgcgaccagcacttcatcgaatcatacgcaacgaaaaacaaagaagcacttggtgc 3480
Query: 179 actcgcaacaaccgcgctcccaagaccacggtacacacctttgtatccaccattggcgaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481 actcgcaacaaccgcgctcccaagaccacggtacacacctttgtatccaccattggcgaa 3540
Query: 239 aaacccacctttagcttgtwaccgggttttcaaggtgtctattgggaaawatgccagatc 298
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3541 aaacccacctttagcttgtaaccgggttttcaaggtgtctattgggaaaaatgccagatc 3600
Query: 299 ggtcgacgttcctgctgcggcaccactcaccaaggacgcaataaacatctgagaatccat 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3601 ggtcgacgttcctgctgcggcaccactcaccaaggacgcaataaacatctgagaatccat 3660
Query: 359 ttcgcactattcccccaaactccgatctataawagactcgtctgagtctgttattgatgt 418
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 3661 ttcgcactattcccccaaactccgatctataaaagactcgtctgagtctgtaattgatgt 3720
Query: 419 acaattcgtctttcaaaccaggtgatggtgcaacaaatgcaaatctttaaatcatacata 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3721 acaattcgtctttcaaaccaggtgatggtgcaacaaatgcaaatctttaaatcatacata 3780
Query: 479 tgtwtatgttcggttcactgctctggcttctttttttttcaacataggatttgaggaaaa 538
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3781 tgtatatgttcggttcactgctctggcttctttttttttcaacataggatttgaggaaaa 3840
Query: 539 aaaatcgagaaatgaaaataattggaatttgggagggaaacacatcttgactaatgcaag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841 aaaatcgagaaatgaaaataattggaatttgggagggaaacacatcttgactaatgcaag 3900
Query: 599 aatcagaatcaaaatagaggagaagaagagtttagagagcaacaaagggtctatattctc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3901 aatcagaatcaaaatagaggagaagaagagtttagagagcaacaaagggtctatattctc 3960
Query: 659 agttgcgtattaggaaattgtctgatagtacaagacctaattttagaaacaagaattgat 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3961 agttgcgtattaggaaattgtctgatagtacaagacctaattttagaaacaagaattgat 4020
Query: 719 tgatacattcagtgtactttcagtgatatcccaggtttttttgttcattgtttttaagga 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4021 tgatacattcagtgtactttcagtgatatcccaggtttttttgttcattgtttttaagga 4080
Query: 779 caaaagctcggttttaaaaggagttatagttctaagatcgtatacaagtttcaagcaaca 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4081 caaaagctcggttttaaaaggagttatagttctaagatcgtatacaagtttcaagcaaca 4140
Query: 839 gtctactatcctaagatagatattgtaatgacgatgacattgttaagaggagt 891
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4141 gtctactatcctaagatagatattgtaatgacgatgacattgttaagaggagt 4193
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7666
Number of Sequences: 1807
Number of extensions: 7666
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)